plot.map {qtl} | R Documentation |
Plot genetic map of marker locations for all chromosomes.
plot.map(x, map2, horizontal=FALSE, ...)
x |
A list whose components are vectors of marker locations. A
cross object may be given instead, in which case the genetic
map it contains is used. |
map2 |
An optional second genetic map with the same number of
chromosomes and markers as the first. As with the first argument, a
cross object may be given instead. If this argument is
given, a comparison of the two genetic maps is plotted. |
horizontal |
Specifies whether the chromosomes should be plotted horizontally. |
... |
Ignored at this point. |
Plots the genetic map for each chromosome, or a comparison of the genetic maps if two maps are given.
For a sex-specific map, female and male maps are plotted against one another. For two sex-specific maps, female maps and male maps are plotted against one another.
None.
Karl W Broman, kbroman@jhsph.edu
data(fake.bc) plot.map(fake.bc) plot.map(fake.bc,horizontal=TRUE) newmap <- est.map(fake.bc) plot(newmap) plot.map(fake.bc, newmap)