pybedtools.scripts.venn_mplΒΆ
Given 3 files, creates a 3-way Venn diagram of intersections using matplotlib; see pybedtools.contrib.venn_maker
for more flexibility.
Numbers are placed on the diagram. If you don't have matplotlib installed. try venn_gchart.py to use the Google Chart API instead.
The values in the diagram assume:
- unstranded intersections
- no features that are nested inside larger features
Functions
main () |
Create a 3-way Venn diagram, using matplotlib |
venn_mpl (a, b, c[, colors, outfn, labels]) |
a, b, and c are filenames to BED-like files. |