scMAGeCK-package |
Identify genes associated with multiple expression phenotypes in single-cell CRISPR screening data |
featurePlot |
Detect the sgRNA distribution and generate Vlnplot to identity gene regulation between different cells. |
pre_processRDS |
Integrate the imformation of sgRNA into RDS file for the further analysis. |
scmageck |
Identify genes associated with multiple expression phenotypes in single-cell CRISPR screening data |
scmageck_lr |
Use linear regression to test the association of gene knockout with all possible genes |
scmageck_rra |
Use RRA to test the association of gene knockout with certain marker expression |
selectPlot |
generate the selection plot |