Gene set analysis based on GSZ-scoring function and asymptotic p-value

---

Documentation for package ‘mGSZ’ version 1.0

• DESCRIPTION file.

Help Pages

calc_z_var	Internal mGSZ function
count.prob.sum	Internal mGSZ function
count_hyge_var_mean	Internal mGSZ function
diffFCscore	Internal mGSZ function
diffScore	Internal mGSZ function
emp	Internal mGSZ function
emp.wrs	Internal WRS function
FC	Internal mGSZ function
flipListStruct	Internal mGSZ function
geneSetsList	Convert gene set data in gmt file to R list
KS.p.values	Internal KS function
KS.score	Internal KS function
listTOclMatrix	Internal mGSZ function
logEVcdf	Internal mGSZ function
logNORMcdf	Internal mGSZ function
mAllez.p.values	Internal mGSZ function
mGSA.p.values	Internal mGSZ function
mGSZ	Gene set analysis based on Gene Set Z-scoring function and asymptotic p-value
mGSZ.adj.mean.std	Internal mGSZ function
mGSZ.p.values	Internal mGSZ function
mGSZ.test.score	Internal mGSZ function
mGSZ.test.score.stb2	Internal mGSZ function
mGSZ.test.score.stb3	Internal mGSZ function
mGSZ.test.score.stb4	Internal mGSZ function
mGSZ.test.score2	Internal mGSZ function
mGSZ.test.score4	Internal mGSZ function
pick.data.cols	Internal mGSZ function
plotProfile	Plot GSZ scoring function profile
rm.rows.with.noSetMembers	Internal mGSZ function
rm.small.genesets	Internal mGSZ function
SS.p.values	Internal mGSZ function
SS.test.score	Internal mGSZ function
StabPlotData	GSZ scoring function profile data
sumTestscore	Internal mGSZ function
sumVarMean_calc	Internal mGSZ function
toMatrix	Internal mGSZ function
toTable	Table with top gene sets
WRS.p.values	Internal WRS function
WRS.test.score	Internal WRS function