TOP Constructs Transferable Model Across Gene Expression Platforms


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Documentation for package ‘TOP’ version 1.6.0

Help Pages

coefNetworkPlot coefNetworkPlot
expit The expit function
filterFeatures filterFeatures
pairwise_col_diff Compute pairwise difference between matrix columns
performance_TOP performance_TOP
predict_TOP Prectict using the Trasferable Omics Prediction model.
ROC_Plot ROC_Plot
simplenetworkPlot simplenetworkPlot
Surv_TOP_CI Create a function to calculate the concordance index.
TOP_coefPlot TOP_coefPlot
TOP_data_binary A simulated binary data
TOP_lambdaPlot TOP_lambdaPlot
TOP_model TOP_model
TOP_survival TOP_survival
TOP_survivalPrediction TOP_survivalPrediction