7 Nov 2008 mcx ctty 1.008, 08-312
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mcxctty - compute the clustering coefficient of a graph
mcx ctty [options] [matrix-file]
mcxctty is not in actual fact a program. This manual page documents the behaviour and options of the mcx program when invoked in mode ctty. The options -h, --apropos, --version, -set, --nop, -progress <num> are accessible in all mcx modes. They are described in the mcx manual page.
mcx ctty [-abc <fname> (specify label input)] [-imx <fname> (specify matrix input)] [-tab <fname> (use tab file)] [--list (list clustering coefficient for all nodes)] [-h (print synopsis, exit)] [--apropos (print synopsis, exit)] [--version (print version, exit)]
mcx ctty computes centrality betweenness for all nodes in a graph, using the between centrality update algorithm from [1].
The input graph/matrix, if specified with the -imx option, has to be in mcl matrix/graph format. You can use label input instead by using the -abc option. Refer to mcxio for a description of these two input formats. By default mcx diameter reads from STDIN and expects matrix format. To specify label input from STDIN use -abc -.
[1] Ulrik Brandes, A Faster Algorithm for Betweenness Centrality. Journal of Mathematical Sociology 25(2): 163-177, (2001). http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.11.2024
mcxio, and mclfamily for an overview of all the documentation and the utilities in the mcl family.